PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_65480.1
Organism
Hordeum vulgare
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 296aa    MW: 31158.4 Da    PI: 6.7495
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_65480.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.62.7e-11127102128
           NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                   ++ktLvfykgrap+g+k+dW+mheyrl
  MLOC_65480.1   1 MRKTLVFYKGRAPHGHKSDWIMHEYRL 27 
                   89***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.029176IPR003441NAC domain
SuperFamilySSF1019411.96E-12137IPR003441NAC domain
SuperFamilySSF1019411.96E-126476IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MRKTLVFYKG RAPHGHKSDW IMHEYRLDDA VAIPSNPANP GAGAYYSGAS SPIRGVAGDQ  60
SSAQEDGWVI CRVFKKKNIV VSQGQNGGGA ASNKLSGAGA APMERSQSNC SSTVTTISSH  120
IKAAQQQEHQ QHQLLHYSAS DDALDHILSH YMHGRSPPTP CKQETKPAPS SGLDHLINNT  180
GCPNGTLYER FMKLPPLEHV VSGGLLQPPT EYGGGGSGNN NSIGTDWDTL DRLATSYELI  240
NGLSDSDVAS ASKNGGMASF FVDGHGGATV TGAGDGDLWS LARSASSLHA DLTTMN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2491200.0AK249120.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006655752.12e-67PREDICTED: NAC domain-containing protein 43-like
TrEMBLM0Y3X40.0M0Y3X4_HORVD; Uncharacterized protein
STRINGMLOC_65480.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP159738112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-24NAC family protein