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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | MLOC_65480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Family | NAC | ||||||||
Protein Properties | Length: 296aa MW: 31158.4 Da PI: 6.7495 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.6 | 2.7e-11 | 1 | 27 | 102 | 128 |
NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 ++ktLvfykgrap+g+k+dW+mheyrl MLOC_65480.1 1 MRKTLVFYKGRAPHGHKSDWIMHEYRL 27 89***********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 20.029 | 1 | 76 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-12 | 1 | 37 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-12 | 64 | 76 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence Send to blast |
MRKTLVFYKG RAPHGHKSDW IMHEYRLDDA VAIPSNPANP GAGAYYSGAS SPIRGVAGDQ 60 SSAQEDGWVI CRVFKKKNIV VSQGQNGGGA ASNKLSGAGA APMERSQSNC SSTVTTISSH 120 IKAAQQQEHQ QHQLLHYSAS DDALDHILSH YMHGRSPPTP CKQETKPAPS SGLDHLINNT 180 GCPNGTLYER FMKLPPLEHV VSGGLLQPPT EYGGGGSGNN NSIGTDWDTL DRLATSYELI 240 NGLSDSDVAS ASKNGGMASF FVDGHGGATV TGAGDGDLWS LARSASSLHA DLTTMN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK249120 | 0.0 | AK249120.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf17a09, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006655752.1 | 2e-67 | PREDICTED: NAC domain-containing protein 43-like | ||||
TrEMBL | M0Y3X4 | 0.0 | M0Y3X4_HORVD; Uncharacterized protein | ||||
STRING | MLOC_65480.1 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1597 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-24 | NAC family protein |